API for mllg/batchtools
Tools for Computation on Batch Systems
| Global functions | |
|---|---|
| .findDone | Source code |
| .findErrors | Source code |
| .findExpired | Source code |
| .findNotDone | Source code |
| .findNotStarted | Source code |
| .findNotSubmitted | Source code |
| .findOnSystem | Source code |
| .findStarted | Source code |
| .findSubmitted | Source code |
| .findTerminated | Source code |
| .onLoad | Source code |
| .reduceResultsList | Source code |
| Algorithm | Man page |
| ClusterFunctions | Man page |
| Experiment | Man page |
| ExperimentRegistry | Man page |
| Hook | Man page |
| Hooks | Man page |
| Job | Man page |
| JobCollection | Man page |
| JobNames | Man page |
| JoinTables | Man page |
| OSError | Source code |
| Problem | Man page |
| Registry | Man page |
| Rscript | Source code |
| SubmitJobResult | Man page |
| Tags | Man page |
| Worker | Man page |
| `%chnin%` | Source code |
| `%nin%` | Source code |
| addAlgorithm | Man page Source code |
| addExperiments | Man page Source code |
| addJobTags | Man page Source code |
| addProblem | Man page Source code |
| addResources | Source code |
| ajoin | Man page Source code |
| allIds | Source code |
| assertRegistry | Man page Source code |
| auto_increment | Source code |
| batchExport | Man page Source code |
| batchMap | Man page Source code |
| batchMapResults | Man page Source code |
| batchMapResultsWrapper | Source code |
| batchReduce | Man page Source code |
| batchReduceWrapper | Source code |
| batchtools | Man page |
| batchtools-package | Man page |
| binpack | Man page Source code |
| btlapply | Man page Source code |
| btmapply | Man page Source code |
| calculateHash | Source code |
| castIds | Source code |
| catf | Source code |
| cfBrewTemplate | Man page Source code |
| cfHandleUnknownSubmitError | Man page Source code |
| cfKillJob | Man page Source code |
| cfReadBrewTemplate | Man page Source code |
| chintersect | Source code |
| chsetdiff | Source code |
| chunk | Man page Source code |
| clearRegistry | Man page Source code |
| convertId | Source code |
| convertIds | Source code |
| count | Source code |
| createCollection | Source code |
| dir | Source code |
| doJobCollection | Man page Source code |
| doJobCollection.JobCollection | Source code |
| doJobCollection.character | Source code |
| estimateRuntimes | Man page Source code |
| example_push_temp | Source code |
| execJob | Man page Source code |
| execJob.Experiment | Source code |
| execJob.Job | Source code |
| execJob.JobCollection | Source code |
| execJob.character | Source code |
| extractLog | Source code |
| file_mtime | Source code |
| file_remove | Source code |
| filter | Source code |
| filterNull | Source code |
| findConfFile | Man page Source code |
| findDone | Man page Source code |
| findErrors | Man page Source code |
| findExperiments | Man page Source code |
| findExpired | Man page Source code |
| findJobs | Man page Source code |
| findNotDone | Man page Source code |
| findNotStarted | Man page Source code |
| findNotSubmitted | Man page Source code |
| findOnSystem | Man page Source code |
| findQueued | Man page Source code |
| findRunning | Man page Source code |
| findStarted | Man page Source code |
| findSubmitted | Man page Source code |
| findTagged | Man page Source code |
| findTemplateFile | Man page Source code |
| flatten | Man page Source code |
| getAlgorithmURI | Source code |
| getBatchIds | Source code |
| getDefaultRegistry | Man page Source code |
| getErrorMessages | Man page Source code |
| getExternalDirs | Source code |
| getJob | Source code |
| getJob.ExperimentCollection | Source code |
| getJob.JobCollection | Source code |
| getJobFiles | Source code |
| getJobNames | Man page Source code |
| getJobPars | Man page Source code |
| getJobPars.ExperimentRegistry | Source code |
| getJobPars.Registry | Source code |
| getJobResources | Man page Source code |
| getJobStatus | Man page Source code |
| getJobTable | Man page Source code |
| getJobTags | Man page Source code |
| getLog | Man page Source code |
| getLogFiles | Source code |
| getProblemCacheDir | Source code |
| getProblemCacheURI | Source code |
| getProblemURI | Source code |
| getResultFiles | Source code |
| getSeed | Source code |
| getSleepFunction | Source code |
| getStatus | Man page Source code |
| getStatusTable | Source code |
| getUsedJobTags | Man page Source code |
| grepLogs | Man page Source code |
| guessBy | Source code |
| ijoin | Man page Source code |
| info | Source code |
| insert | Source code |
| is.error | Source code |
| isLocalHost | Source code |
| killJobs | Man page Source code |
| ljoin | Man page Source code |
| loadRegistry | Man page Source code |
| loadRegistryDependencies | Source code |
| loadResult | Man page Source code |
| lpt | Man page Source code |
| makeClusterFunctions | Man page Source code |
| makeClusterFunctionsDocker | Man page Source code |
| makeClusterFunctionsInteractive | Man page Source code |
| makeClusterFunctionsLSF | Man page Source code |
| makeClusterFunctionsMulticore | Man page Source code |
| makeClusterFunctionsOpenLava | Man page Source code |
| makeClusterFunctionsSGE | Man page Source code |
| makeClusterFunctionsSSH | Man page Source code |
| makeClusterFunctionsSlurm | Man page Source code |
| makeClusterFunctionsSocket | Man page Source code |
| makeClusterFunctionsTORQUE | Man page Source code |
| makeExperimentRegistry | Man page Source code |
| makeJob | Man page Source code |
| makeJob.ExperimentRegistry | Source code |
| makeJob.Registry | Source code |
| makeJobCollection | Man page Source code |
| makeJobCollection.ExperimentRegistry | Source code |
| makeJobCollection.Registry | Source code |
| makeProgressBar | Source code |
| makeRegistry | Man page Source code |
| makeSubmitJobResult | Man page Source code |
| mangle | Source code |
| mergeRegistries | Source code |
| mergedJobs | Source code |
| messagef | Source code |
| noIds | Source code |
| now | Source code |
| ojoin | Man page Source code |
| print.ClusterFunctions | Source code |
| print.ExperimentRegistry | Source code |
| print.JobCollection | Source code |
| print.Registry | Source code |
| print.RuntimeEstimate | Man page Source code |
| print.Status | Source code |
| print.SubmitJobResult | Source code |
| readLog | Source code |
| readRegistry | Source code |
| reduceResults | Man page Source code |
| reduceResultsDataTable | Man page Source code |
| reduceResultsList | Man page Source code |
| removeAlgorithms | Man page Source code |
| removeExperiments | Man page Source code |
| removeJobTags | Man page Source code |
| removeProblems | Man page Source code |
| removeRegistry | Man page Source code |
| resetJobs | Man page Source code |
| rjoin | Man page Source code |
| rnd_hash | Source code |
| runHook | Man page Source code |
| runHook.JobCollection | Source code |
| runHook.Registry | Source code |
| runOSCommand | Man page Source code |
| saveRegistry | Man page Source code |
| seq_row | Source code |
| setClasses | Source code |
| setDefaultRegistry | Man page Source code |
| setJobNames | Man page Source code |
| setKey | Source code |
| setSystemConf | Source code |
| showLog | Man page Source code |
| sjoin | Man page Source code |
| stopf | Source code |
| stri_trunc | Source code |
| submitJobs | Man page Source code |
| summarizeExperiments | Man page Source code |
| sweepRegistry | Man page Source code |
| sync | Source code |
| syncRegistry | Man page Source code |
| testJob | Man page Source code |
| ujoin | Man page Source code |
| unmangle | Source code |
| unwrap | Man page Source code |
| updateRegistry | Source code |
| ustamp | Source code |
| waitForFile | Source code |
| waitForFiles | Source code |
| waitForJobs | Man page Source code |
| warningf | Source code |
| writeRDS | Source code |
