flAdd: Adds one row (i.e. one density) to an existing DensityData...

In mlux86/flowLearn: flowLearn

Description

Adds one row (i.e. one density) to an existing DensityData object.

Usage

flAdd(obj, fcs, population, channelIdx, parentDensX, parentDensY,
  gate.low = NaN, gate.high = NaN)

Arguments

obj	The existing DensityData object.
fcs	The fcs file name of the new density.
population	The population of the new density.
channelIdx	The channel index of the new density.
parentDensX	The parent population's density x-values of the gated population.
parentDensY	The parent population's density y-values of the gated population.
gate.low	The lower threshold of the gated channel (optional, default: NaN).
gate.high	The upper threshold of the gated channel (optional, default: NaN).

Value

The supplied DensityData obj, including a new row with the supplied parameters.

Examples

densdat <- flInit(new('DensityData')) # create empty DensityData object
densdat <- flAdd(densdat, 'mine.fcs', 'CD43+', 1, 1:512, runif(n = 512, min = 1, max = 10), 2, 7) # add one channel density

mlux86/flowLearn documentation built on May 29, 2019, 5:43 a.m.