flSelectPrototypes: Given a DensityData object, selects a number of prototype...

Description Usage Arguments Value Examples

Description

Using PAM clustering on L1 density distances, this method returns a list of prototype indices which are rows in the given DensityData object.

Usage

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flSelectPrototypes(densdat, k)

Arguments

densdat

The DensityData object. It should contain densities from the same channel only.

k

The number of prototypes.

Value

Vector of indices in the densdat data that were determined to be prototypes.

Examples

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dd <- flFind(flSampleDensdat, population = 'notplasma', channelIdx = 2)
protoIdx <- flSelectPrototypes(dd, 1)
print(protoIdx)

mlux86/flowLearn documentation built on May 29, 2019, 5:43 a.m.