normalize.bysignal: Normalize signal intensity

View source: R/Normalize.R

normalize.bysignalR Documentation

Normalize signal intensity

Description

Divides all signals by a single signal. Defaults to the largest signal and makes all signals between 0-1.

Usage

normalize.bysignal(
  AssayDat,
  Signal = "BckSubSignal",
  SignalStat = "SDSignal",
  NormalizationSignalType = NULL,
  NameofNormalizationSignal = NULL,
  GroupBy = c("DNA", "Minutes", "Protein")
)

Arguments

AssayDat

Df of the long data table input file

Signal

The quoted column name of the assay intensity signal

SignalStat

The quoted column name ofsecond signal to normalize. Often the Standard Deviation

NormalizationSignalType

The variable type of the signal to divide all other signals

NameofNormalizationSignal

The quoted name of the signal to divide all other signals

GroupBy

The names of the variables over which the assay data is separated including minutes. Defaults to DNA, Protein and Minutes. @return long Df of all signals divided by the maximum value of the chosen signal


mohrbp/AnalyzeAssay documentation built on Oct. 2, 2022, 5:54 p.m.