merge.Assay5: Merge Assays

In mojaveazure/seurat-object: Data Structures for Single Cell Data

Merge Assays

Description

Merge one or more v5 assays together

Usage

## S3 method for class 'Assay5'
merge(x, y, labels = NULL, add.cell.ids = NULL, collapse = FALSE, ...)

Arguments

x	An Assay5 object
y	One or more Assay5 objects
labels	A character vector equal to the number of objects; defaults to as.character(seq_along(c(x, y)))
add.cell.ids	A character vector equal to the number of objects provided to append to all cell names; if TRUE, uses labels as add.cell.ids
collapse	If TRUE, merge layers of the same name together; if FALSE, appends labels to the layer name
...	Ignored

Details

Note: collapsing layers is currently not supported

Value

A new v5 assay with data merged from c(x, y)

See Also

v5 Assay object, validity, and interaction methods: $.Assay5(), Assay5-class, Assay5-validity, [.Assay5(), [[.Assay5(), dim.Assay5(), dimnames.Assay5(), split.Assay5(), subset.Assay5()

mojaveazure/seurat-object documentation built on Dec. 13, 2024, 9:23 a.m.