sub-sub-.DimReduc: Get Cell Embeddings

In mojaveazure/seurat-object: Data Structures for Single Cell Data

Get Cell Embeddings

Description

Pull cell embeddings from a dimensional reduction

Usage

## S3 method for class 'DimReduc'
x[[i, j, drop = FALSE, ...]]

Arguments

x	A DimReduc object
i	Cell names or indices
j	Dimension identifiers or indices
drop	Coerce the result to the lowest possible dimension; see drop for further details
...	Arguments passed to other methods

Value

Cell embeddings for cells i and dimensions j

See Also

Embeddings

Dimensional reduction object, validity, and interaction methods CreateDimReducObject(), DimReduc-class, DimReduc-validity, [.DimReduc(), dim.DimReduc(), merge.DimReduc(), print.DimReduc(), subset.DimReduc()

Examples

pca <- pbmc_small[["pca"]]
pca[[1:10, 1:5]]

mojaveazure/seurat-object documentation built on Nov. 22, 2024, 11:36 p.m.