API for morrislab/TrackSigFreq
TrackSig - cancer evolutionary trajectory estimation
| Global functions | |
|---|---|
| TS.trajectory | Source code |
| TrackSig | Man page Source code |
| addPhiHist | Man page Source code |
| annotateCn | Source code |
| betaLL | Source code |
| detectActiveSignatures | Man page Source code |
| distributeBinCounts | Source code |
| fitMixturesEM | Source code |
| fitMixturesInTimeline | Source code |
| generateContext | Source code |
| getActualMinSegLen | Source code |
| getBinCounts | Source code |
| getChangepointsPELT | Source code |
| getTrinuc | Source code |
| getVcaf | Source code |
| is.TS.trajectory | Source code |
| makeBinaryTable | Source code |
| mixtureLL | Source code |
| parseCnaFile | Source code |
| parsePurityFile | Source code |
| parseScoreMethod | Source code |
| parseVcfFile | Source code |
| plotChangepointChoice | Source code |
| plotTrajectory | Man page Source code |
| recoverChangepoints | Source code |
| round_percent | Source code |
| scorePartitionsPELT | Source code |
| sumBetaMixtureLL | Source code |
| vcafConstruction | Source code |
| vcfToCounts | Source code |
