mpierrejean/jointSeg-1: Joint Segmentation of Multivariate (Copy Number) Signals

Methods for fast segmentation of multivariate signals into piecewise constant profiles and for generating realistic copy-number profiles. A typical application is the joint segmentation of total DNA copy numbers and allelic ratios obtained from Single Nucleotide Polymorphism (SNP) microarrays in cancer studies. The methods are described in Pierre-Jean, Rigaill and Neuvial (2015) <doi:10.1093/bib/bbu026>.

Getting started

Package details

Maintainer
LicenseLGPL (>= 2.1)
Version1.0.2
URL https://github.com/mpierrejean/jointseg
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("mpierrejean/jointSeg-1")
mpierrejean/jointSeg-1 documentation built on Jan. 10, 2019, 2:19 a.m.