Man pages for mpru/BIMEGA
BIMEGA: BIvariate Methylation and Expression GAussian mixture model
| BatchData | BatchData data set |
| BIMEGA | BIMEGA: Bivariate Gaussian Mixture model for DNA methylation... |
| BIMEGA_Plot | The BIMEGA_Plot function. |
| ClusterProbes | The ClusterProbes function |
| ComBat_NoFiles | The ComBat_NoFiles function |
| combineForEachOutput | The combineForEachOutput function |
| Download_DNAmethylation | The Download_DNAmethylation function |
| Download_GeneExpression | The Download_GeneExpression function |
| fitRobustRegression_robustbase | The fitRobustRegression_robustbase function |
| GetData | The GetData function |
| get_firehoseData | The get_firehoseData function |
| getMvalues | The getMvalues function |
| MAcancer | Cancer Gene expression data of glioblastoma patients from the... |
| MAnormal | Normal Gene expression data of glioblastoma patients |
| METcancer | DNA methylation data from cancer tissue from glioblastoma... |
| METnormal | DNA methylation data from normal tissue from glioblastoma... |
| MixtureModel_Biv | The MixtureModel_Biv function |
| modelGeneExpression | The modelGeneExpression function |
| ModelSingleGene_Biv | The ModelSingleGene_Biv function |
| Preprocess_CancerSite_Methylation27k | The Preprocess_CancerSite_Methylation27k function |
| Preprocess_CancerSite_Methylation450k | The Preprocess_CancerSite_Methylation450k function |
| Preprocess_DNAmethylation | The Preprocess_DNAmethylation function |
| Preprocess_GeneExpression | The Preprocess_GeneExpression function |
| Preprocess_MAdata_Cancer | The Preprocess_MAdata_Cancer function |
| Preprocess_MAdata_Normal | The Preprocess_MAdata_Cancer function |
| ProbeAnnotation | ProbeAnnotation data set |
| SNPprobes | SNPprobes data set |
| TCGA_BatchCorrection_MolecularData | The TCGA_BatchCorrection_MolecularData function |
| TCGA_GENERIC_BatchCorrection | The TCGA_GENERIC_BatchCorrection function |
| TCGA_GENERIC_CheckBatchEffect | The TCGA_GENERIC_CheckBatchEffect function |
| TCGA_GENERIC_CleanUpSampleNames | The TCGA_GENERIC_CleanUpSampleNames function |
| TCGA_GENERIC_GetSampleGroups | The TCGA_GENERIC_GetSampleGroups function |
| TCGA_GENERIC_LoadIlluminaMethylationData | The TCGA_GENERIC_LoadIlluminaMethylationData function |
| TCGA_GENERIC_MergeData | The TCGA_GENERIC_MergeData function |
| TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust | The... |
| TCGA_Load_MolecularData | The TCGA_Load_MolecularData function |
| TCGA_Process_EstimateMissingValues | The TCGA_Process_EstimateMissingValues function |
