mipanalyzer_biallelic_to_vcfR: Converts a MIPanalyzer biallelic object to vcfR
In mrc-ide/MIPanalyzer: Filtering and analysis of MIP data
View source: R/data_wrangling.R
mipanalyzer_biallelic_to_vcfR R Documentation
Converts a MIPanalyzer biallelic object to vcfR
Description
Converts an object of class mipanalyzer_biallelic to
vcfR format.
Usage
mipanalyzer_biallelic_to_vcfR(input = NULL, cutoff = 0.1)
Arguments
input
an object of class mipanalyzer_biallelic.
cutoff
the within-sample non-referent allele frequency cutoff to
transform your biallelic site to a genotype matrix.
mrc-ide/MIPanalyzer documentation built on Jan. 17, 2024, 7:16 p.m.
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View source: R/data_wrangling.R
| mipanalyzer_biallelic_to_vcfR | R Documentation |
Converts a MIPanalyzer biallelic object to vcfR
Description
Converts an object of class mipanalyzer_biallelic to
vcfR format.
Usage
mipanalyzer_biallelic_to_vcfR(input = NULL, cutoff = 0.1)
Arguments
input |
an object of class |
cutoff |
the within-sample non-referent allele frequency cutoff to transform your biallelic site to a genotype matrix. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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