define_NGM: Defines the 3 state next generation matrix
In mrc-ide/MissingCases: Uses next generation matrices to estimate numbers of missing cases in an epidemic linelist
define_NGM R Documentation
Defines the 3 state next generation matrix
Description
Defines the 3 state next generation matrix
Usage
define_NGM(pi, alpha, gamma, phi)
Arguments
pi
Proportion of cases detected or “re-captured” by community surveillance
alpha
Reduction in transmission intensity due to active surveillance
gamma
Proportion of contacts actively under surveillance
phi
Proportion of contacts recalled
Value
The three state next generation matrix
Examples
define_NGM(0.5, 0.8, 0.7, 0.5)
mrc-ide/MissingCases documentation built on Sept. 14, 2022, 6:49 a.m.
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| define_NGM | R Documentation |
Defines the 3 state next generation matrix
Description
Defines the 3 state next generation matrix
Usage
define_NGM(pi, alpha, gamma, phi)
Arguments
pi |
Proportion of cases detected or “re-captured” by community surveillance |
alpha |
Reduction in transmission intensity due to active surveillance |
gamma |
Proportion of contacts actively under surveillance |
phi |
Proportion of contacts recalled |
Value
The three state next generation matrix
Examples
define_NGM(0.5, 0.8, 0.7, 0.5)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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