R/data.R

#' Patches' nearest neighbors
#'
#' A dataset containing the id of the 8 nearest neighboring patches to each patch.
#'  The variables are as follows:
#'
#' @format A matrix with 21 rows and 8 columns:
#'
#' @references \url{https://science.sciencemag.org/node/681801.full}
"nn_links"

#' Amplitude and phase of seasonal forcing
#'
#' A dataset containing the amplitude and phase values of seasonal forcing for each patch.
#'
#' @format A matrix with 21 rows and 3 columns:
"amplitudes_phases"

#' Brazil birth rates
#'
#' A dataset containing the per capita birth rates for 11 age classes for Brazil.
#'
#' @format A numeric vector of length 11:
"br_brazil_age"

#' ZIKV-induced microcephaly risk during pregancy
#'
#' A dataset containing the probability that a foetus developes microcephaly
#' given that the mother is infected with ZIKV in a particular day of pregnancy.
#'
#' @format A dataframe of 280 rows and 2 columns:
"mc_prob_ZIKV_pregn"
mrc-ide/ZikaModel documentation built on Sept. 14, 2022, 8:51 a.m.