sero_det: Create a sero detection probability density function

Description Usage Arguments

View source: R/sero_utils.R

Description

Create a sero detection probability density function

Usage

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sero_det(
  ret = "igg",
  igg_conv = 13.3,
  igm_conv = 12.3,
  igg_sens = 0.914,
  igm_sens = 0.894,
  igg_scale = 139,
  igm_scale = 50,
  pdfl = 600
)

Arguments

ret

What antibody are we detecting. Must be one of "igg", "igm" or "iggm". Default = "igg

igg_conv

Mean days for IgG seroconversion. Default = 13.3

igm_conv

Mean days for IgM seroconversion. Default = 12.3

igg_sens

Max sensitivity for IgG. Default = 0.914

igm_sens

Max sensitivity for IgM. Default = 0.894

igg_scale

Weibull seroreversion decay scale for IgG. Default = 139

igm_scale

Weibull seroreversion decay scale for IgM. Default = 50

pdfl

Length of probability density function. Default = 600 days


mrc-ide/india-ascertainment documentation built on Jan. 20, 2022, 11:51 p.m.