extract_pjnz_naomi: Extract Model Inputs from Spectrum PJNZ

In mrc-ide/naomi: Naomi Model for Subnational HIV Estimates

Extract Model Inputs from Spectrum PJNZ

Description

If the .shiny90 file does not exist within the .PJNZ, the function will silently not return values, even if extract_shiny90 = TRUE.

Usage

extract_pjnz_naomi(pjnz_list, extract_shiny90 = TRUE)

Arguments

pjnz_list	Vector of filepaths to Spectrum PJNZ file.
extract_shiny90	Logical; whether to attempt to extract .shiny90 zip

Value

A data.frame with Spectrum indicators.

Examples

pjnz <- system.file("extdata/demo_mwi2019.PJNZ", package = "naomi")
spec <- extract_pjnz_naomi(pjnz)

mrc-ide/naomi documentation built on April 10, 2024, 2:13 p.m.