plot_p_spline_phe: Plotting function for the P_spline model

In mrc-ide/reactidd: Package for the temporal analysis of the REACT study

Plotting function for the P_spline model

Description

Plotting function for the P_spline model

Usage

plot_p_spline_phe(
  X,
  Y,
  p_spline_fit,
  target_dist_between_knots = 5,
  spline_degree = 3,
  ylim = 5000
)

Arguments

X	date vector.
Y	Numeric vector of number of positive samples
target_dist_between_knots	sets the number of days between adjacent knots (default = 5)
spline_degree	sets the degree of the splines (default = 3)
ylim	sets the ylimit of the plot created
p_splinefit	fit of the model to the same set o data using reactidd::stan_p_spline_phe()

Value

A list of the created plot, the raw data and CI's used in the plot, the raw data for the model fit in the plot.

Plot of the model fit

mrc-ide/reactidd documentation built on May 12, 2024, 11:47 a.m.