mrc-ide/skygrowth: Phylodynamic inference with nonparametric growth rate models

This package provides methods for inferring effective population size for time-scaled phylogenies using Bayesian MCMC and maximum a priori. The growth rate of effective population sizes is modeled as a simple Brownian motion.

Getting started

Package details

AuthorErik M Volz and Xavier Didelot
MaintainerErik M Volz <[email protected]>
LicenseMIT + file LICENSE
Version0.2.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("mrc-ide/skygrowth")
mrc-ide/skygrowth documentation built on Sept. 26, 2018, 7:58 a.m.