intervention_dates_for_odin: Prepare intervention timing for odin

In mrc-ide/squire: SEIR transmission model of COVID-19

Prepare intervention timing for odin

Description

Prepare dates of intervention for use with odin. This function exists to make explicit how time changes through the model relative to the data and to odin's internal clock.

Usage

intervention_dates_for_odin(
  dates,
  change,
  start_date,
  steps_per_day,
  starting_change = 1
)

Arguments

dates	Dates (or ISO-formatted strings for conversion with as.Date at which intervention changes.
change	Variable that is changing at each of dates.
start_date	The date to start the simulation from..
steps_per_day	The number of steps per day
starting_change	The first value to use for change in the case that all provided dates are after start_date

Details

If start date is after elements in dates, these will be trimmed accordinly and the final change value used as the value one day after start date.

mrc-ide/squire documentation built on Sept. 10, 2022, 1:11 a.m.