mrgoptim: Fit a model to data using maximum likelihood objective...

Description Usage Arguments

Description

Fit a model to data using maximum likelihood objective function with newuoa or optim

Usage

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mrgoptim(mod, input, output, var, prms, v_prms, cov = T, restarts = 0,
  method = "newuoa", options = list(maxit = 10000))

Arguments

mod

a model object

input

a numeric vector containing observation compartments in data_set to be fit

output

a character vector containing names of pred output columns

var

a character vector containing names of variance output columns of preds

prms

a character vector of parameters to fit

v_prms

a character vector of variance parameters to fit

cov

logical, perform covariance step

restarts

number of times to restart fit with final estimates of previous optimization

method

method to be used: "newuoa","Nelder-Mead", "BFGS", "CG", "L-BFGS-B", "SANN", "Brent"

options

options passed to optim function, see ?optim for more information


mrgsolve/mrgsolvetk documentation built on May 11, 2019, 4:19 p.m.