mshasan/OPWpaper1
Reproduce figures and simulations of OPWeight

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Reproduce figures and simulations of OPWeight

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DESCRIPTION
NAMESPACE
OPWpaper.Rproj
R/fwerPowerFdrPower.R R/nice_plots.R R/probRel_CovVsTest_effect.R R/prob_weight_plots.R R/ranksProb_byEffect.R R/ranksProb_compare.R R/ranksProb_compare_plots.R R/roeder_wasserman_weight.R R/runif_by_mean.R R/simu_fwer.R R/test_by_block.R R/weight_byEffect_bin.R R/weight_byEffect_cont.R README.md
inst/exdata/bottomly_count_table.txt
inst/exdata/bottomly_phenodata.txt
inst/exdata/science_signaling.csv
inst/real_data_examples/bottomly_data_example.R inst/real_data_examples/proteomics_data_example.R inst/real_data_examples/readme.md
inst/real_data_examples/results/bottomly_data_example.RDATA
inst/real_data_examples/results/bottomly_data_example.png
inst/real_data_examples/results/proteomics_data_example.RDATA
inst/real_data_examples/results/proteomics_data_example.png
inst/simulations/results/ranksProb_byEffect_m10000.csv
inst/simulations/results/simu_fwer.RData
inst/simulations/results/simu_fwerPowerFdrPower_bin.RData
inst/simulations/results/simu_fwerPowerFdrPower_cont.RData
inst/simulations/results/simu_fwerPowerFdrPower_missVar_bin.RData
inst/simulations/results/simu_fwerPowerFdrPower_missVar_cont.RData
inst/simulations/results/simu_probRel_CovVsTest_effect.RData
inst/simulations/results/simu_prob_rank_givenEffect.RData
inst/simulations/results/weight_byEffect_bin_m10000.csv
inst/simulations/results/weight_byEffect_cont_m10000.csv
inst/simulations/simu_fwer.R inst/simulations/simu_fwerPowerFdrPower.R inst/simulations/simu_fwerPowerFdrPower_plots.R inst/simulations/simu_probRel_CovVsTest_effect.R inst/simulations/simu_probRel_CovVsTest_effect_plots.R inst/simulations/simu_prob_weight_plots.R inst/simulations/simu_ranksProb_byEffect.R inst/simulations/simu_ranksProb_compare.R inst/simulations/simu_ranksProb_compare_plots.R inst/simulations/simu_weight_byEffect_bin.R inst/simulations/simu_weight_byEffect_cont.R man/fwerPowerFdrPower.Rd man/nice_plots.Rd man/probRel_CovVsTest_effect.Rd man/prob_weight_plots.Rd man/ranksProb_byEffect.Rd man/ranksProb_compare.Rd man/ranksProb_compare_plots.Rd man/roeder_wasserman_weight.Rd man/runif_by_mean.Rd man/simu_fwer.Rd man/test_by_block.Rd man/weightSum_by_c.Rd man/weight_byEffect_bin.Rd man/weight_byEffect_cont.Rd tests/testthat.R tests/testthat/test_by_block.R tests/testthat/test_fwerPowerFdrPower.R tests/testthat/test_nice_plots.R tests/testthat/test_probRel_filterVstest_effect.R tests/testthat/test_prob_weight_plots.R tests/testthat/test_ranksProb_byEffect.R tests/testthat/test_ranksProb_compare.R tests/testthat/test_ranksProb_compare_plots.R tests/testthat/test_roeder_wasserman_weight.R tests/testthat/test_runif_by_mean.R tests/testthat/test_simu_fwer.R tests/testthat/weight_byEffect_bin.R tests/testthat/weight_byEffect_cont.R vignettes/FWER_and_FDR.R vignettes/FWER_and_FDR.Rmd
vignettes/FWER_and_FDR.html
vignettes/Power.R vignettes/Power.Rmd
vignettes/Power.html
vignettes/bibliography.bib
vignettes/filterEffect_testEffect.R vignettes/probRel_CovVsTest_effect.R vignettes/probRel_CovVsTest_effect.Rmd
vignettes/probRel_CovVsTest_effect.html
vignettes/ranksProb_weight.R vignettes/ranksProb_weight.Rmd
vignettes/ranksProb_weight.html
vignettes/ranks_probability.R vignettes/ranks_probability.Rmd
vignettes/ranks_probability.html
vignettes/real_data_examples.R vignettes/real_data_examples.Rmd
vignettes/real_data_examples.html
mshasan/OPWpaper1 documentation built on Feb. 22, 2021, 10:22 a.m.

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