Files in mskilab/fragCounter
GC mappability correction and segmentation
.Rbuildignore
.Rhistory
.github/.gitignore
.github/workflows/check-release.yaml
.github/workflows/test-coverage.yaml
.github/workflows/test-coverage.yaml~
DESCRIPTION
LICENSE
NAMESPACE
R/.Rhistory
R/fragCounter.R
README.Rmd
README.md
codecov.yml
frag
inst/extdata/chr21.bam
inst/extdata/chr21.bam.bai
inst/extdata/chr21.bigWig
inst/extdata/cov21.rds
inst/extdata/cov21_exome.rds
inst/extdata/frag
inst/extdata/gcMAP21/gc200.rds
inst/extdata/gcMAP21/gcexome.rds
inst/extdata/gcMAP21/map200.rds
inst/extdata/gcMAP21/mapexome.rds
inst/extdata/gcmap.19/gc1000.rds
inst/extdata/gcmap.19/gc200.rds
inst/extdata/gcmap.19/map1000.rds
inst/extdata/gcmap.19/map200.rds
inst/extdata/gcmap.38/gc1000.rds
inst/extdata/gcmap.38/gc200.rds
inst/extdata/gcmap.38/map1000.rds
inst/extdata/gcmap.38/map200.rds
inst/extdata/gcmap.hg38.200bp.tar.gz
inst/extdata/hg19_chr21.2bit
inst/extdata/samp.rds
inst/extdata/sample_blacklist.rds
man/GC.fun.Rd
man/MAP.fun.Rd
man/PrepareCov.Rd
man/alpha.Rd
man/bam.cov.skel.Rd
man/bamorcram.Rd
man/coco.Rd
man/correctcov_stub.Rd
man/fragCounter.Rd
man/make.blacklist.Rd
man/multicoco.Rd
old.travis.yml
tests/testthat.R
tests/testthat/test_fragCounter.R
