dot-sample.spec2: .sample.spec2
In mskilab/loosends: Classifying loose ends in gGraphs
.sample.spec2 R Documentation
.sample.spec2
Description
loads reads and mates for a single sample (tumor or normal)
assumes that BAM has already been filtered and avoids slow lapply
Usage
.sample.spec2(bam, chrsub = TRUE, verbose = FALSE)
Arguments
bam
path to BAM file
chrsub
(logical) substitute chr header? default TRUE
verbose
optional, default=FALSE
mskilab/loosends documentation built on Aug. 24, 2023, 8:08 a.m.
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| .sample.spec2 | R Documentation |
.sample.spec2
Description
loads reads and mates for a single sample (tumor or normal) assumes that BAM has already been filtered and avoids slow lapply
Usage
.sample.spec2(bam, chrsub = TRUE, verbose = FALSE)
Arguments
bam |
path to BAM file |
chrsub |
(logical) substitute chr header? default TRUE |
verbose |
optional, default=FALSE |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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