apqmodeldesign-methods: Extract protein model design from IsoAPQModelDesign object
Description Usage Arguments Value
Description
Extract protein model design from IsoAPQModelDesign object
Extract fixed effects model design from IsoAPQModelDesign object
Extract random model design from IsoAPQModelDesign object
Extract response vector from IsoAPQModelDesign object
Extract counts for levels of random effects from IsoAPQModelDesign object
Extract vector that describes independent blocks from IsoAPQModelDesign object
Check if model described by IsoAPQModelDesign has fixed effects
Check if model described by IsoAPQModelDesign has random effects
Extract model formula from IsoAPQModelDesign object
Extract number of random effects from IsoAPQModelDesign object
Extract number of fixed effects from IsoAPQModelDesign object
Extract number of proteins from IsoAPQModelDesign object
Extract number of observations from IsoAPQModelDesign object
Check if model described by IsoAPQModelDesign is linear
Get analytical gradient for a IsoAPQModelDesign object
Get negative log-likelihood for a IsoAPQModelDesign object
Fit a nonlinear mixed effects model based on a IsoAPQModelDesign object
Usage
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 | getIsoProteinDesign(x)
getIsoFixedDesign(x)
getIsoRandomDesign(x)
getIsoResponse(x)
getIsoEffectsCounts(x)
getIsoIndependentUnit(x)
hasIsoFixedEffects(x)
hasIsoRandomEffects(x)
getIsoFormula(x)
getIsoNumRandom(x)
getIsoNumFixed(x)
getIsoNumProteins(x)
getIsoNumObservations(x)
isIsoLinear(x)
getIsoAnalyticalGradient(x)
getIsoLogLikelihood(x)
fitIsoModel(x, ...)
|
Arguments
x |
object of class IsoAPQModelDesign |
Value
matrix
matrix
matrix
numeric vector
numeric vector
character vecotr
logical
logical
formula
integer
integer
integer
integer
logical
function of a single parameter
function of a single parameter
object of class IsoAPQModel
