isoapqmodeldesign: Create a description of model design for nonlinear mixed...
In mstaniak/SharedPeptidesIso:

Create a description of model design for nonlinear mixed effects model

Create design for nonlinear mixed effects model based on isotopic distribution

1	IsoAPQModelDesign(model_formula, model_design_list = NULL, model_data = NULL)

`model_design_list`	optional list of elements of the model design
`inheritParams`	IsoAPQModel

object of class IsoAPQModelDesign

protein: protein design matrix - 0-1 matrix with a column for each protein in the dataset
fixed: design matrix for fixed effects
random: design matrix for random effects
response: response - numeric vector
counts: counts of levels of random effects
formula: model formula
independent_unit: character vector that specifiec independent blocks in the data
num_proteins: number of proteins
num_random_effects: number of random effects
num_fixed_effects: number of fixed effects
num_observations: number of observations