TENxMatrix-class: TENxMatrix objects

In mtmorgan/TENxGenomics: Interface to 10x Genomics data

Description

A container for representing 10xGenomics data. TENxMatrix extends DelayedArray so all the operations available on DelayedArray objects work on TENxMatrix objects.

Usage

## S4 method for signature 'TENxMatrixSeed'
dim(x)

## S4 method for signature 'TENxMatrixSeed'
dimnames(x)

TENxMatrix(h5path, group = "mm10")

Arguments

x	A TENxMatrix-class or TENxMatrixSeed-class object.
h5path	character(1) path to the 10xGenomics hdf5 file, or a TENxMatrixSeed instance.
group	character(1) group (e.g., “mm10”) containing scRNA-seq data; only allowed when h5path is a character(1).

Value

TENxMatrix() returns a TENxMatrix instance; dim(), dimnames() and all other DelayedArray methods operate on this instance.

mtmorgan/TENxGenomics documentation built on May 23, 2019, 8:19 a.m.