API for mturchin20/bmass
Bayesian multivariate analysis of summary statistics

Global functions
AnnotateDataWithGWASSNPs Source code
AnnotateMergedDataWithGWASSNPs Source code
CheckCharacterClass Source code
CheckDataFrameFormat Source code
CheckDataSourceDirectionColumn Source code
CheckDataSourceHeaders Source code
CheckDataSourceMAFFixed Source code
CheckDataSourceMAFIsMAF Source code
CheckForAndReplaceOnes Source code
CheckForAndReplaceZeroes Source code
CheckForInfiniteZScores Source code
CheckIndividualDataSources Source code
CheckVariableExists Source code
CollapseSigmaAlphasTogether Source code
CountModelClasses Source code
DetermineAndApplyPriors Source code
ExploreBestModelsUsingPosteriors Source code
FinalizeAndFormatResults Source code
GetLogBFsFromData Source code
GetMarginalPosteriors Source code
GetModelPriorMatrix Source code
GetSumAcrossSigmaAlphas_withPriors Source code
GetTopModelsPerSNPViaPosteriors Source code
GetZScoreAndDirection Source code
MergeDataSources Source code
OpenLogFile Source code
PlotMarginalPosteriors Source code
PlotMarginalPosteriors.ForManuscript Source code
PlotMarginalPosteriors.withDirection Source code
PlotMarginalPosteriors.withDirection.ForManuscript Source code
PlotZScores.OrderedByClusteredMarginals Source code
PlotZScores.OrderedByClusteredMarginals.ForManuscript Source code
PlotZScores.OrderedByClusteredMarginals.withDirection.ForManuscr Source code
ProcessMergedAndAnnotatedDataSources Source code
ReplaceInfiniteZScoresWithMax Source code
WriteLogFile Source code
WriteTableLogFile Source code
bmass Source code
centered.lbf Source code
compute.allBFs.fromZscores Source code
computeprior Source code
em.priorprobs Source code
indephits Source code
lbf.all Source code
lbf.av Source code
lbf.uni Source code
logBF.fromVSummaries Source code
marginal.postprobs Source code
normalize Source code
posteriorprob Source code
mturchin20/bmass documentation built on Oct. 22, 2017, 8:28 p.m.