construct_interactome: Construct an interaction network
In murodzhon/PCSF: Network-based interpretation of highthroughput data
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Given a list of edges, construct_interactome generates
an interaction network which is used as a template network to interpret the highthrougput data.
Usage
1
Arguments
ppi
A list of edges. A data.frame composed of three columns, where each
row corresponds to an edge in which the first element is a head, the second
element is a tail, and the last element represents the cost of the edge.
Value
An interaction network as igraph object.
Author(s)
Murodzhon Akhmedov
Examples
1
2
3
4
5
## Not run:
library("PCSF")
data("STRING")
ppi <- construct_interactome(STRING)
## End(Not run)
murodzhon/PCSF documentation built on May 14, 2019, 10:35 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Given a list of edges, construct_interactome generates
an interaction network which is used as a template network to interpret the highthrougput data.
Usage
1 |
Arguments
ppi |
A list of edges. A |
Value
An interaction network as igraph object.
Author(s)
Murodzhon Akhmedov
Examples
1 2 3 4 5 | ## Not run:
library("PCSF")
data("STRING")
ppi <- construct_interactome(STRING)
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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