smooth_hist | R Documentation |
Uses a generalized additive model (GAM) to smooth a histogram for whitestripe
smooth_hist( x, y, deg = 4, k = floor(min(250, length(x)/2)), method = "REML", ... )
x |
values of midpoints from |
y |
values of counts from |
deg |
degree of polynomials used |
k |
Number of knots |
method |
Method for smoothing for GAM |
... |
Arguments passed to |
List of objects: x and y coordinates of histogram, coefficients from GAM, fitted values from GAM, the GAM model, the knots fitted, and degrees of polynomials
gam
data(t2.voi.hist) y = t2.voi.hist$counts x = t2.voi.hist$mids x = x[!is.na(y)]; y = y[!is.na(y)] # 30 used for speed of example s.hist = smooth_hist(x, y, k=30) plot(t2.voi.hist, border="red") lines(s.hist)
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