extractProtAAC: Amino Acid Composition Descriptor

extractProtAACR Documentation

Amino Acid Composition Descriptor

Description

Amino Acid Composition Descriptor

Usage

extractProtAAC(x)

Arguments

x

A character vector, as the input protein sequence.

Details

This function calculates the Amino Acid Composition descriptor (Dim: 20).

Value

A length 20 named vector

References

M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.

See Also

See extractProtDC and extractProtTC for Dipeptide Composition and Tripeptide Composition descriptors.

Examples

x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtAAC(x)


nanxstats/Rcpi documentation built on Sept. 24, 2024, 9:36 a.m.