extractProtCTriad: Conjoint Triad Descriptor
In nanxstats/Rcpi: Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
extractProtCTriad R Documentation
Conjoint Triad Descriptor
Description
Conjoint Triad Descriptor
Usage
extractProtCTriad(x)
Arguments
x
A character vector, as the input protein sequence.
Details
This function calculates the Conjoint Triad descriptor (Dim: 343).
Value
A length 343 named vector
References
J.W. Shen, J. Zhang, X.M. Luo, W.L. Zhu,
K.Q. Yu, K.X. Chen, Y.X. Li, H.L. Jiang.
Predicting Protein-protein Interactions Based Only on Sequences Information.
Proceedings of the National Academy of Sciences. 007, 104, 4337–4341.
Examples
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtCTriad(x)
nanxstats/Rcpi documentation built on Sept. 24, 2024, 9:36 a.m.
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| extractProtCTriad | R Documentation |
Conjoint Triad Descriptor
Description
Conjoint Triad Descriptor
Usage
extractProtCTriad(x)
Arguments
x |
A character vector, as the input protein sequence. |
Details
This function calculates the Conjoint Triad descriptor (Dim: 343).
Value
A length 343 named vector
References
J.W. Shen, J. Zhang, X.M. Luo, W.L. Zhu, K.Q. Yu, K.X. Chen, Y.X. Li, H.L. Jiang. Predicting Protein-protein Interactions Based Only on Sequences Information. Proceedings of the National Academy of Sciences. 007, 104, 4337–4341.
Examples
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtCTriad(x)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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