extractProtTC: Tripeptide Composition Descriptor
In nanxstats/Rcpi: Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
extractProtTC R Documentation
Tripeptide Composition Descriptor
Description
Tripeptide Composition Descriptor
Usage
extractProtTC(x)
Arguments
x
A character vector, as the input protein sequence.
Details
This function calculates the Tripeptide Composition descriptor (Dim: 8000).
Value
A length 8000 named vector
References
M. Bhasin, G. P. S. Raghava.
Classification of Nuclear Receptors Based on
Amino Acid Composition and Dipeptide Composition.
Journal of Biological Chemistry, 2004, 279, 23262.
See Also
See extractProtAAC and extractProtDC
for Amino Acid Composition and Dipeptide Composition descriptors.
Examples
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtTC(x)
nanxstats/Rcpi documentation built on Sept. 24, 2024, 9:36 a.m.
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| extractProtTC | R Documentation |
Tripeptide Composition Descriptor
Description
Tripeptide Composition Descriptor
Usage
extractProtTC(x)
Arguments
x |
A character vector, as the input protein sequence. |
Details
This function calculates the Tripeptide Composition descriptor (Dim: 8000).
Value
A length 8000 named vector
References
M. Bhasin, G. P. S. Raghava. Classification of Nuclear Receptors Based on Amino Acid Composition and Dipeptide Composition. Journal of Biological Chemistry, 2004, 279, 23262.
See Also
See extractProtAAC and extractProtDC
for Amino Acid Composition and Dipeptide Composition descriptors.
Examples
x = readFASTA(system.file('protseq/P00750.fasta', package = 'Rcpi'))[[1]]
extractProtTC(x)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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