getSeqFromKEGG: Retrieve Protein Sequence from the KEGG Database

In nanxstats/Rcpi: Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery

Retrieve Protein Sequence from the KEGG Database

Description

Retrieve Protein Sequence from the KEGG Database

Usage

getSeqFromKEGG(id, parallel = 5)

Arguments

id	A character vector, as the protein ID.
parallel	An integer, the parallel parameter, indicates how many process the user would like to use for retrieving the data (using RCurl), default is 5. For regular cases, we recommend a number less than 20.

Details

This function retrieves protein represented by amino acid sequence from the KEGG database.

Value

A list, each component contains one of the protein represented by amino acid sequence(s).

See Also

See getFASTAFromKEGG for retrieving protein sequence in FASTA format from the KEGG database.

Examples

id = c('hsa:10161', 'hsa:10162')

getSeqFromKEGG(id)

nanxstats/Rcpi documentation built on Sept. 24, 2024, 9:36 a.m.