getSmiFromKEGG: Retrieve Drug Molecules in SMILES Format from the KEGG...
In nanxstats/Rcpi: Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery
getSmiFromKEGG R Documentation
Retrieve Drug Molecules in SMILES Format from the KEGG Database
Description
Retrieve Drug Molecules in SMILES Format from the KEGG Database
Usage
getSmiFromKEGG(id, parallel = 5)
Arguments
id
A character vector, as the KEGG drug ID.
parallel
An integer, the parallel parameter, indicates how many
process the user would like to use for retrieving
the data (using RCurl), default is 5.
For regular cases, we recommend a number less than 20.
Details
This function retrieves drug molecules in SMILES format from the
KEGG database.
Value
A length of id character vector,
each element containing the corresponding drug molecule.
See Also
See getMolFromKEGG for retrieving drug molecules
in MOL format from the KEGG database.
Examples
id = 'D00496' # Penicillamine
getSmiFromKEGG(id)
nanxstats/Rcpi documentation built on Sept. 24, 2024, 9:36 a.m.
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| getSmiFromKEGG | R Documentation |
Retrieve Drug Molecules in SMILES Format from the KEGG Database
Description
Retrieve Drug Molecules in SMILES Format from the KEGG Database
Usage
getSmiFromKEGG(id, parallel = 5)
Arguments
id |
A character vector, as the KEGG drug ID. |
parallel |
An integer, the parallel parameter, indicates how many
process the user would like to use for retrieving
the data (using RCurl), default is |
Details
This function retrieves drug molecules in SMILES format from the KEGG database.
Value
A length of id character vector,
each element containing the corresponding drug molecule.
See Also
See getMolFromKEGG for retrieving drug molecules
in MOL format from the KEGG database.
Examples
id = 'D00496' # Penicillamine
getSmiFromKEGG(id)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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