Files in nathaniel-mahieu/centWaveP
CWT Based Chromatographic Peak Detection
.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/MassSpecWavelet.R
R/cent_centWave.R
R/continuous_wavelet_transform.R
R/estimate_baseline_noise.R
R/filter_noise.R
R/findPeaks_xcms_wrapper.R
R/plot_wave_peak.R
R/wave_centWave.R
R/xcms_cwTools.R
README.md
inst/baseline_comparison.Rmd
inst/comparison.Rmd
inst/comparison.md
inst/cwt.Rmd
inst/cwt.html
inst/cwt.md
inst/eic.rds
inst/estimate resolution mass dependence.xlsx
inst/estimate_baseline_noise.Rmd
inst/estimate_baseline_noise.md
inst/evaluate_noise_cutoffs.Rmd
inst/figure_baseline/unnamed-chunk-2-1.png
inst/figure_baseline/unnamed-chunk-2-2.png
inst/figure_baseline/unnamed-chunk-2-3.png
inst/figure_baseline/unnamed-chunk-2-4.png
inst/figure_baseline/unnamed-chunk-2-5.png
inst/figure_baseline/unnamed-chunk-2-6.png
inst/figure_baseline/unnamed-chunk-3-1.png
inst/figure_baseline/unnamed-chunk-3-2.png
inst/figure_baseline/unnamed-chunk-3-3.png
inst/figure_baseline/unnamed-chunk-3-4.png
inst/figure_baseline/unnamed-chunk-3-5.png
inst/figure_baseline/unnamed-chunk-3-6.png
inst/figure_comparison/unnamed-chunk-10-1.png
inst/figure_comparison/unnamed-chunk-11-1.png
inst/figure_comparison/unnamed-chunk-12-1.png
inst/figure_comparison/unnamed-chunk-13-1.png
inst/figure_comparison/unnamed-chunk-2-1.png
inst/figure_comparison/unnamed-chunk-2-2.png
inst/figure_comparison/unnamed-chunk-2-3.png
inst/figure_comparison/unnamed-chunk-2-4.png
inst/figure_comparison/unnamed-chunk-2-5.png
inst/figure_comparison/unnamed-chunk-2-6.png
inst/figure_comparison/unnamed-chunk-2-7.png
inst/figure_comparison/unnamed-chunk-2-8.png
inst/figure_comparison/unnamed-chunk-4-1.png
inst/figure_comparison/unnamed-chunk-5-1.png
inst/figure_comparison/unnamed-chunk-6-1.png
inst/figure_comparison/unnamed-chunk-7-1.png
inst/figure_comparison/unnamed-chunk-8-1.png
inst/figure_comparison/unnamed-chunk-9-1.png
inst/figure_cwt/unnamed-chunk-2-1.png
inst/figure_cwt/unnamed-chunk-2-10.png
inst/figure_cwt/unnamed-chunk-2-2.png
inst/figure_cwt/unnamed-chunk-2-3.png
inst/figure_cwt/unnamed-chunk-2-4.png
inst/figure_cwt/unnamed-chunk-2-5.png
inst/figure_cwt/unnamed-chunk-2-6.png
inst/figure_cwt/unnamed-chunk-2-7.png
inst/figure_cwt/unnamed-chunk-2-8.png
inst/figure_cwt/unnamed-chunk-2-9.png
inst/figure_cwt/unnamed-chunk-3-1.png
inst/figure_cwt/unnamed-chunk-3-10.png
inst/figure_cwt/unnamed-chunk-3-2.png
inst/figure_cwt/unnamed-chunk-3-3.png
inst/figure_cwt/unnamed-chunk-3-4.png
inst/figure_cwt/unnamed-chunk-3-5.png
inst/figure_cwt/unnamed-chunk-3-6.png
inst/figure_cwt/unnamed-chunk-3-7.png
inst/figure_cwt/unnamed-chunk-3-8.png
inst/figure_cwt/unnamed-chunk-3-9.png
inst/figure_cwt/unnamed-chunk-4-1.png
inst/figure_cwt/unnamed-chunk-4-10.png
inst/figure_cwt/unnamed-chunk-4-11.png
inst/figure_cwt/unnamed-chunk-4-2.png
inst/figure_cwt/unnamed-chunk-4-3.png
inst/figure_cwt/unnamed-chunk-4-4.png
inst/figure_cwt/unnamed-chunk-4-5.png
inst/figure_cwt/unnamed-chunk-4-6.png
inst/figure_cwt/unnamed-chunk-4-7.png
inst/figure_cwt/unnamed-chunk-4-8.png
inst/figure_cwt/unnamed-chunk-4-9.png
inst/figure_cwt/unnamed-chunk-5-1.png
inst/figure_cwt/unnamed-chunk-5-10.png
inst/figure_cwt/unnamed-chunk-5-11.png
inst/figure_cwt/unnamed-chunk-5-2.png
inst/figure_cwt/unnamed-chunk-5-3.png
inst/figure_cwt/unnamed-chunk-5-4.png
inst/figure_cwt/unnamed-chunk-5-5.png
inst/figure_cwt/unnamed-chunk-5-6.png
inst/figure_cwt/unnamed-chunk-5-7.png
inst/figure_cwt/unnamed-chunk-5-8.png
inst/figure_cwt/unnamed-chunk-5-9.png
inst/figure_wave/unnamed-chunk-2-1.png
inst/figure_wave/unnamed-chunk-2-10.png
inst/figure_wave/unnamed-chunk-2-2.png
inst/figure_wave/unnamed-chunk-2-3.png
inst/figure_wave/unnamed-chunk-2-4.png
inst/figure_wave/unnamed-chunk-2-5.png
inst/figure_wave/unnamed-chunk-2-6.png
inst/figure_wave/unnamed-chunk-2-7.png
inst/figure_wave/unnamed-chunk-2-8.png
inst/figure_wave/unnamed-chunk-2-9.png
inst/figure_wave/unnamed-chunk-3-1.png
inst/figure_wave/unnamed-chunk-3-2.png
inst/figure_wave/unnamed-chunk-3-3.png
inst/figure_wave/unnamed-chunk-3-4.png
inst/figure_wave/unnamed-chunk-3-5.png
inst/figure_wave/unnamed-chunk-3-6.png
inst/wave_centWave.Rmd
inst/wave_centWave.md
inst/workflow.Rmd
man/cent.Rd
man/cent.xr.Rd
man/cwt.Rd
man/estimateBaselineNoise.Rd
man/findLorentzianNoise.Rd
man/findNoise.Rd
man/findShoulderPeaks.Rd
man/getLorentzianPeakshape.Rd
man/plotWavePeak.Rd
man/wave.Rd
src/.gitignore
src/cwTools.c
src/mzROI.c
