cmtkreglist: Make in-memory CMTK registration list from affine matrix or...

In natverse/nat: NeuroAnatomy Toolbox for Analysis of 3D Image Data

Make in-memory CMTK registration list from affine matrix or CMTK parameters

Description

Make in-memory CMTK registration list from affine matrix or CMTK parameters

Usage

cmtkreglist(x, centre = c(0, 0, 0), reference = "dummy", floating = "dummy")

Arguments

x	5x3 matrix of CMTK registration parameters OR 4x4 homogeneous affine matrix
centre	Optional centre of rotation passed to affmat2cmtkparams when decomposing 4x4 affine matrix
reference, floating	Path to reference and floating images.

Details

Note that this uses the modern CMTK notation of floating_study rather than model_study as used by IGSParamsToIGSRegistration (which results in an implicit inversion by CMTK tools).

Note that the reference and floating fields have no impact on the transformation encoded in the resultant .list folder and can be overridden on the command line of CMTK tools.

Value

list of class cmtkreg containing registration parameters suitable for write.cmtkreg

See Also

write.cmtkreg, affmat2cmtkparams, cmtkreg

natverse/nat documentation built on Feb. 19, 2024, 7:19 a.m.