ComputeAnalyteCoefMetafeature: Compute the importance using absolute value of analyte term...

In ncats/MultiOmicsGraphPrediction: Network-Based Ensemble Prediction from IntLIM Predictors

Compute the importance using absolute value of analyte term coefficient. Specifically, the coefficient percentile is calculated and taken as the weight.

Description

Compute the importance using absolute value of analyte term coefficient. Specifically, the coefficient percentile is calculated and taken as the weight.

Usage

ComputeAnalyteCoefMetafeature(predictions, modelStats)

Arguments

predictions	Prediction data frame, where rows are samples, and columns are predictors.
modelStats	A data frame that includes the interaction p-values, interaction coefficients, and other coefficients for each pair (such as the one output by IntLIM's ProcessResults function)

Value

A data frame with the importance metric for each sample and each predictor. The metric will be the same for all samples in this case.

ncats/MultiOmicsGraphPrediction documentation built on Aug. 23, 2023, 9:19 a.m.