scRepertoire was built to process data derived from the 10x Genomics Chromium Immune Profiling for both T-cell receptor (TCR) and immunoglobulin (Ig) enrichment workflows and subsequently interacts with the popular Seurat and SingleCellExperiment R packages. It also allows for general analysis of single-cell clonotype information without the use of expression information. The package functions as a wrapper for Startrac and powerTCR R packages.
|Bioconductor views||Annotation Classification ImmunoOncology Sequencing SingleCell Software|
|License||Apache License 2.0|
|Package repository||View on GitHub|
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