scRepertoire was built to process data derived from the 10x Genomics Chromium Immune Profiling for both T-cell receptor (TCR) and immunoglobulin (Ig) enrichment workflows and subsequently interacts with the popular Seurat and SingleCellExperiment R packages. It also allows for general analysis of single-cell clonotype information without the use of expression information. The package functions as a wrapper for Startrac and powerTCR R packages.
Package details |
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Bioconductor views | Annotation Classification ImmunoOncology Sequencing SingleCell Software |
Maintainer | |
License | GPL-2 |
Version | 1.5.2 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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