extExpGEO: Extract Expression Matrix

In ndhutso/geneSummary: Summarize GEOquery data

Description

Extracts the gene expression matrix for GEO data

Usage

extExpGEO(data, geneSymbol=NA, long=FALSE)

Arguments

data	data imported using GEOquery
geneSymbol	the gene "name" or "symbol"
long	a boolean value entered for the data returned to be in a long format

Author(s)

Nicholas Hutson

Examples

data <- getGEO("GSE443452")
geneSymbol <- "TP53"
long <- TRUE
extExp(data, geneSymbol, long)

ndhutso/geneSummary documentation built on Nov. 4, 2019, 8:43 p.m.