Man pages for ne1s0n/MTGOsc
MTGO analysis applied to Single Cell data
| call.MTGO | Calls for MTGO execution |
| clean.filename | Clean a string so that it's a valid file name |
| coexpr_propr | Compute coexpression via propr::propr |
| dummy.function | Dummy function for import management |
| export.network.modules | Export functional modules network |
| export.network.single.module | Export single module network(s) |
| get.filenames | List standard filenames |
| thinning_abs_threshold | Subset a coexpression network for thresholded absolute values |
| thinning_percentile | Subset a coexpression network to the desired percentile |
| thinning_scale_free | Subset a coexpression network to maximise free scale fit |
| verify.java | Verifies if the correct Java version is installed on the... |
| write.coexpressionMatrix | Compute and save a coexpression matrix |
| write.dictionary | Create and save a dictionary file |
| write.edges | Compute and save network edges |
| write.paramFile | Writes a MTGO parameter file on disk |
