Man pages for nehiljain/genewiseR
A tool to perform pool gwas analysis in R,
| dir_merge | Combines all the files in a directory using a Full Outer Join... |
| dir_rbind | Rowise combine all the files in a directory |
| generate_new_snp_ids | Get new snp ids for snps not found in ref db. |
| get_max_and_mean | calculates snp count, max and mean on given column name and... |
| get_nlp | if the out file path is not given then it returns the... |
| get_significant_snps | if the out file path is not given then it returns the... |
| get_snp_ids | Get Snp IDs of the variants found in the study dataset.... |
| get_topQ | Top Q statistics. Uses Hmisc cut2 to get mean of nlp(negative... |
| map_snps_to_gene | It finds all the snps in genome that are in gene +/-... |
| norm_var_names | Converts character vector to sanitised varirable names |
| p_adjustment | This function add a new column to the datatable created by... |
| p_adjustment_summary | column names in order chromosome number, snp id, snp position... |
