Man pages for nehiljain/genewiseR
A tool to perform pool gwas analysis in R,

dir_mergeCombines all the files in a directory using a Full Outer Join...
dir_rbindRowise combine all the files in a directory
generate_new_snp_idsGet new snp ids for snps not found in ref db.
get_max_and_meancalculates snp count, max and mean on given column name and...
get_nlpif the out file path is not given then it returns the...
get_significant_snpsif the out file path is not given then it returns the...
get_snp_idsGet Snp IDs of the variants found in the study dataset....
get_topQTop Q statistics. Uses Hmisc cut2 to get mean of nlp(negative...
map_snps_to_geneIt finds all the snps in genome that are in gene +/-...
norm_var_namesConverts character vector to sanitised varirable names
p_adjustmentThis function add a new column to the datatable created by...
p_adjustment_summarycolumn names in order chromosome number, snp id, snp position...
nehiljain/genewiseR documentation built on May 23, 2017, 11:39 a.m.