map_snps_to_gene: It finds all the snps in genome that are in gene +/-...
In nehiljain/genewiseR: A tool to perform pool gwas analysis in R,
Description
Usage
Arguments
Value
Description
It finds all the snps in genome that are in gene +/- window_size
Usage
1
map_snps_to_gene(study_df, ref_df, window_size = 1000, out_file_path = NULL)
Arguments
study_df
: a datatable with snp information identified in the study. Should have column names - chr_no, snp_pos
ref_df
: is the Bos taraus data which has gene_start, gene_end and chr_no column names
window_size
: gene start and end +/- window_size
Value
a dt with all snps in gene windows
nehiljain/genewiseR documentation built on May 23, 2019, 1:31 p.m.
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Description Usage Arguments Value
Description
It finds all the snps in genome that are in gene +/- window_size
Usage
1 | map_snps_to_gene(study_df, ref_df, window_size = 1000, out_file_path = NULL)
|
Arguments
study_df |
: a datatable with snp information identified in the study. Should have column names - chr_no, snp_pos |
ref_df |
: is the Bos taraus data which has gene_start, gene_end and chr_no column names |
window_size |
: gene start and end +/- window_size |
Value
a dt with all snps in gene windows
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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