plotMetricsBoxplot: Metric values as a boxplot.

In neobernad/evaluomeR: Evaluation of Bioinformatics Metrics

Metric values as a boxplot.

Description

It plots the value of the metrics in a SummarizedExperiment object as a boxplot.

Usage

plotMetricsBoxplot(data)

Arguments

data

A SummarizedExperiment. The SummarizedExperiment must contain an assay with the following structure: A valid header with names. The first column of the header is the ID or name of the instance of the dataset (e.g., ontology, pathway, etc.) on which the metrics are measured. The other columns of the header contains the names of the metrics. The rows contains the measurements of the metrics for each instance in the dataset.

Value

Nothing.

Examples

# Using example data from our package
data("ontMetrics")
plotMetricsBoxplot(ontMetrics)

neobernad/evaluomeR documentation built on Feb. 28, 2024, 12:37 p.m.