run_pca: run_pca
In nephantes/debrowser_bioconductor_release: Interactive Differential Expresion Analysis Browser
Description
Usage
Arguments
Value
Examples
Description
Runs PCA on the selected dataset.
Usage
1
Arguments
x,
dataframe with experiment data
retx,
specifies if the data should be returned
center,
center the PCA (Boolean)
scale,
scale the PCA (Boolean)
Value
pca list
Examples
1
2
3
4
load(system.file("extdata", "demo", "demodata.Rda",
package="debrowser"))
pca_data<-run_pca(getNormalizedMatrix(
demodata[rowSums(demodata[,1:6])>10,1:6]))
nephantes/debrowser_bioconductor_release documentation built on May 29, 2019, 7:15 a.m.
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Description Usage Arguments Value Examples
Description
Runs PCA on the selected dataset.
Usage
1 |
Arguments
x, |
dataframe with experiment data |
retx, |
specifies if the data should be returned |
center, |
center the PCA (Boolean) |
scale, |
scale the PCA (Boolean) |
Value
pca list
Examples
1 2 3 4 | load(system.file("extdata", "demo", "demodata.Rda",
package="debrowser"))
pca_data<-run_pca(getNormalizedMatrix(
demodata[rowSums(demodata[,1:6])>10,1:6]))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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