nesscoder/TimeCycle: TimeCycle: Topology Inspired MEthod for the Detection of Cycling Transcripts

TimeCycle is designed to detect rhythmic genes in circadian transcriptomic time-series data. Based on topological data analysis, TimeCycle provides a reliable and efficent reference-free framework for cycle detection --- handling custom sampling schemes, replicates, and missing data. See the TimeCycle website and accompanying paper for more information, documentation, and examples.

Getting started

Package details

Maintainer
LicenseMIT + file LICENSE
Version1.0.0
URL https://github.com/nesscoder/TimeCycle
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("nesscoder/TimeCycle")
nesscoder/TimeCycle documentation built on June 29, 2021, 5:16 a.m.