R/data.R

In neural-stem-cell-institute/screp: A Package for Enrichment Testing and Visualization of Single Cell RNA-Seq Clusters

#' markers
#'
#' A dataset from 10X genomics containing single cell RNA-seq data from ~3K peripheral blood mononuclear cells  analyzed for cluster markers.
#'
#' @format a data frame that is the result of the FIndAllMarkers function in Seurat
#'
"markers"

#' RPR
#'
#' The "Pathways hierarchy relationship" file downloaded from https://reactome.org/download-data in August 2020.
#'
#' @format a table read in by read.delim()
#'
"RPR"

#' RP
#'
#' The "Complete List of Pathways" file downloaded from https://reactome.org/download-data in August 2020.
#'
#' @format a table read in by read.delim()
#'
"RP"