Description Usage Arguments Value
This function calls AFNI command passed to func
1 2 3 4 5 |
func |
(character) AFNI function |
file |
(character) image to be manipulated |
outfile |
(character) resultant image name (optional) |
retimg |
(logical) return image of class nifti |
reorient |
(logical) If retimg, should file be reoriented when read in?
Passed to |
intern |
(logical) to be passed to |
opts |
(character) operations to be passed to |
verbose |
(logical) print out command before running |
samefile |
(logical) is the output the same file? |
opts_after_outfile |
(logical) should |
frontopts |
(character) options/character to put in before filename |
add_ext |
(logical) should the extension be added to
the |
bin_app |
(character) appendix to add to |
quote_file |
should the filename be quoted in double quotes? |
quote_outfile |
should the output filename be quoted in double quotes? |
run |
(logical) Should the command be run? If this is false, nothing is done |
... |
additional arguments passed to |
If retimg
then object of class nifti. Otherwise,
Result from system command, depends if intern is TRUE or FALSE.
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