Description Usage Arguments Value Note Examples
MRI Defacer
1 2 3 4 5 6 7 8 9 10 11 12 13 |
file |
input file image to remove face/ears |
... |
not used |
verbose |
print diagnostic messages. If |
brain_mask |
brain mask of file. If |
bet_opts |
options to pass to |
search_radius |
search radius option to pass to |
opts |
additional options to pass to |
template_brain |
template brain image, may be |
template_brain_weight |
template brain weight image, used
for registration may be |
template_biometric_mask |
template biometric mask. Everything that
is wanted should be |
A character filename of the output image
Adapted from https://github.com/mih/mridefacer
1 2 3 4 5 6 | if (have_fsl()) {
file = "~/Downloads/sample_T1_input.nii.gz"
if (file.exists(file)) {
res = mridefacer(file)
}
}
|
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