rpi_orient: Reorient an Image to RPI orientation

In neuroconductor-devel-releases/fslr: Wrapper Functions for 'FSL' ('FMRIB' Software Library) from Functional MRI of the Brain ('FMRIB')

Description

This function uses fslswapdim to reorient an image

Usage

rpi_orient(file, verbose = TRUE)

rpi_orient_file(file, verbose = TRUE)

is_rpi(file, verbose = FALSE)

is.rpi(file, verbose = FALSE)

Arguments

file	Object of class nifti or character path
verbose	print diagnostic messages

Value

List of 3 elements

• img: Reoriented image of class nifti

• convention: Convention (Neurological/Radiological) of original image

• orientation: Original image orientations

neuroconductor-devel-releases/fslr documentation built on May 6, 2020, 4:22 p.m.