Description Usage Arguments Value Note Examples
Plotting function for an orthographic view of a 3-dimensional image
1 2 3 4 5 6 7 8 9 10 11 12 | construct_ggortho(img, overlay = NULL, xyz = NULL, crosshairs = TRUE,
col = gray(0:64/64), col.overlay = oro.nifti::hotmetal(), ...)
ggortho(img, overlay = NULL, xyz = NULL, crosshairs = TRUE, ...)
ggortho2(...)
ggortho_img_df(img_df, overlay_df = NULL, xyz = NULL, crosshairs = TRUE)
ggortho_base()
ggortho_slice_df(slice_df, slice_overlay_df = NULL, crosshairs = TRUE)
|
img |
object that can be coerced to a |
overlay |
object that can be coerced to a |
xyz |
coordinates to be plotted |
crosshairs |
should crosshairs be added? |
col |
Colors to map intensities for |
col.overlay |
Colors to map intensities for |
... |
arguments to pass to |
img_df |
Image |
overlay_df |
Image |
slice_df |
Image |
slice_overlay_df |
Image |
construct_ggortho
returns a list of the constructed plot,
the full data for the image, the image for the plot and the xyz
coordinate.
ggortho
simply returns the plot
ggortho2
is a duplicate of ggortho
to agree with the
ortho2
of neurobae
1 2 3 |
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