Description Usage Arguments Value
View source: R/afni_3dTshift.R
Converts an AFNI file to an NIfTI file or nifti
using 3dTshift
1 2 3 4 5 |
file |
AFNI BRIK or HEAD file |
tr |
Repetition time. You may attach the suffix 's' for seconds, or 'ms' for milliseconds. |
tpattern |
Pattern of slice time pattern. alt+z = altplus = alternating in the plus direction alt+z2 = alternating, starting at slice #1 instead of #0 alt-z = altminus = alternating in the minus direction alt-z2 = alternating, starting at slice #nz-2 instead of #nz-1 seq+z = seqplus = sequential in the plus direction seq-z = seqminus = sequential in the minus direction |
tzero |
time offset to align each slice to (The default alignment time is the average of the 'tpattern' values) |
slice |
slice number indicating the time offset to align each slice to.
If this is specified |
ignore_vols |
Number of volumes to ignore/delete |
opts |
Additional options to pass to |
retimg |
Should an image be returned? |
... |
additional arguments to |
If retimg
then object of class nifti. Otherwise,
the outfile
argument is returned (or a temporary filename)
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